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Table 3 Data sets used for pyrosequencing and bacterial diversity indices

From: Effect of pH on soil bacterial diversity

Samples

No. of reads

No. of OTUs

Richness (Margalef)

Evenness (Pielou)

Diversity index

Raw

Chimera removed

Simpson (D = 1/λ)a

Shannon-Weaver (H’)

Site 1

1465

1428

165

22.58

0.93

0.99

4.76

Site 2

6149

5842

66

7.49

0.64

0.85

2.65

  1. aReciprocal of Simpson index and Shannon-Weaver index, higher numbers represent greater diversity